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papers

• Genome structure and population genomics of the canine heartworm Dirofilaria immitis
• Trophic ecology of Octopus vulgaris paralarvae along the Iberian Canary current eastern boundary upwelling system
• The stage- and sex-specific transcriptome of the human parasite Schistosoma mansoni
• A single-cell atlas of the free-living miracidium larva of Schistosoma mansoni
• Evaluation of genome skimming to detect and characterise human and livestock helminths
• Faecal egg counts and nemabiome metabarcoding highlight the genomic complexity of equine cyathostomin communities and provide insight into their dynamics in a Scottish native pony herd
• Genomic landscape of drug response reveals mediators of anthelmintic resistance
• Improving helminth genome resources in the post-genomic era
• Genome-wide analysis of Schistosoma mansoni reveals population structure and praziquantel drug selection pressure within Ugandan hot-spot communities
• Allele specific PCR for a major marker of levamisole resistance in Haemonchus contortus
• Ivermectin and albendazole coadministration: opportunities for strongyloidiasis control
• Population genomics of ancient and modern Trichuris trichiura
• Transcriptomic analyses implicate neuronal plasticity and chloride homeostasis in ivermectin resistance and response to treatment in a parasitic nematode
• An adaptive phase II/III safety and efficacy randomized controlled trial of single day or three-day fixed-dose albendazole-ivermectin co-formulation versus albendazole for the treatment of Trichuris trichiura and other STH infections. ALIVE trial protocol
• Worms and bugs of the gut: the search for diagnostic signatures using barcoding, and metagenomics–metabolomics
• A genetic TRP down the channel to praziquantel resistance
• Genome-wide analysis of response to ivermectin treatment by a Swedish field population of Haemonchus contortus
• Phenotypic and genotypic analysis of benzimidazole resistance in reciprocal genetic crosses of Haemonchus contortus
• The genome sequence of the Australian filarial nematode, Cercopithifilaria johnstoni
• Assembled chromosomes of the blood fluke Schistosoma mansoni provide insight into the evolution of its ZW sex-determination system
• Phylogeographic patterns of the Australian grass trees (Xanthorrhoea Asphodelaceae) shown using targeted amplicon sequencing
• Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni
• Challenges and opportunities for the adoption of molecular diagnostics for anthelmintic resistance
• Population genomic evidence that human and animal infections in Africa come from the same populations of Dracunculus medinensis
• Complete representation of a tapeworm genome reveals chromosomes capped by centromeres, necessitating a dual role in segregation and protection
• Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm
• Screening the Saccharomyces cerevisiae nonessential gene Deletion library reveals diverse mechanisms of action for antifungal plant defensins
• The global diversity of Haemonchus contortus is shaped by human intervention and climate
• The confounding effects of high genetic diversity on the determination and interpretation of differential gene expression analysis in the parasitic nematode Haemonchus contortus
• Evaluation of DNA Extraction Methods on Individual Helminth Egg and Larval Stages for Whole-Genome Sequencing
• Utility of the Onchocerca volvulus mitochondrial genome for delineation of parasite transmission zones
• Refugia and anthelmintic resistance: Concepts and challenges
• Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus
• Genome-wide sequencing uncovers cryptic diversity and mito-nuclear discordance in the Octopus vulgaris species complex
• Genome-wide approaches to Investigate anthelmintic resistance
• Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi
• Comparative genomics of the major parasitic worms
• Reduced variation in Wolbachia density of larval stages in comparison with adults of Onchocerca volvulus: implications for clinical outcome of infection?
• Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
• A Genome Resequencing-Based Genetic Map Reveals the Recombination Landscape of an Outbred Parasitic Nematode in the Presence of Polyploidy and Polyandry
• Genome-wide analysis of ivermectin response by Onchocerca volvulus reveals genetic drift and soft selective sweeps contribute to loss of drug sensitivity
• PLAG1 deficiency impairs spermatogenesis and sperm motility in mice
• Genomic introgression mapping of field-derived multiple-anthelmintic resistance in Teladorsagia circumcincta
• You Are What You Eat: A Genomic Analysis of the Gut Microbiome of Captive and Wild Octopus vulgaris Paralarvae and Their Zooplankton Prey
• Significant heterogeneity in Wolbachia copy number within and between populations of Onchocerca volvulus
• The genome of Onchocerca volvulus, agent of river blindness
• Outlier SNPs enable food traceability of the southern rock lobster, Jasus edwardsii
• Discrimination between Onchocerca volvulus and O. ochengi filarial larvae in Simulium damnosum (s.l.) and their distribution throughout central Ghana using a versatile high-resolution speciation assay
• Massively parallel sequencing of customised forensically informative SNP panels on the MiSeq
• Locating and Activating Molecular ‘Time Bombs’: Induction of Mycolata Prophages
• MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing
• Exemplary multiplex bisulfite amplicon data used to demonstrate the utility of Methpat
• Low-coverage MiSeq next generation sequencing reveals the mitochondrial genome of the Eastern Rock Lobster, Sagmariasus verreauxi
• Evidence of evolutionary constraints on the sequence composition of mitochondrial matrix targeting sequences
• Enhanced annealing of mismatched oligonucleotides using a novel melting curve assay allows efficient in vitro discrimination and restriction of a single nucleotide polymorphism
• Mitochondrial gene therapy an evaluation of strategies for the treatment of mitochondrial DNA disorders
• Differential intracellular distribution of DNA complexed with polyethylenimine (PEI) and PEI-polyarginine PTD influences exogenous gene expression within live COS-7 cells

paper

• Genome structure and population genomics of the canine heartworm Dirofilaria immitis
• Trophic ecology of Octopus vulgaris paralarvae along the Iberian Canary current eastern boundary upwelling system
• The stage- and sex-specific transcriptome of the human parasite Schistosoma mansoni
• A single-cell atlas of the free-living miracidium larva of Schistosoma mansoni
• Evaluation of genome skimming to detect and characterise human and livestock helminths
• Faecal egg counts and nemabiome metabarcoding highlight the genomic complexity of equine cyathostomin communities and provide insight into their dynamics in a Scottish native pony herd
• Genomic landscape of drug response reveals mediators of anthelmintic resistance
• Improving helminth genome resources in the post-genomic era
• Genome-wide analysis of Schistosoma mansoni reveals population structure and praziquantel drug selection pressure within Ugandan hot-spot communities
• Allele specific PCR for a major marker of levamisole resistance in Haemonchus contortus
• Ivermectin and albendazole coadministration: opportunities for strongyloidiasis control
• Population genomics of ancient and modern Trichuris trichiura
• Transcriptomic analyses implicate neuronal plasticity and chloride homeostasis in ivermectin resistance and response to treatment in a parasitic nematode
• An adaptive phase II/III safety and efficacy randomized controlled trial of single day or three-day fixed-dose albendazole-ivermectin co-formulation versus albendazole for the treatment of Trichuris trichiura and other STH infections. ALIVE trial protocol
• Worms and bugs of the gut: the search for diagnostic signatures using barcoding, and metagenomics–metabolomics
• A genetic TRP down the channel to praziquantel resistance
• Genome-wide analysis of response to ivermectin treatment by a Swedish field population of Haemonchus contortus
• Phenotypic and genotypic analysis of benzimidazole resistance in reciprocal genetic crosses of Haemonchus contortus
• The genome sequence of the Australian filarial nematode, Cercopithifilaria johnstoni
• Assembled chromosomes of the blood fluke Schistosoma mansoni provide insight into the evolution of its ZW sex-determination system
• Phylogeographic patterns of the Australian grass trees (Xanthorrhoea Asphodelaceae) shown using targeted amplicon sequencing
• Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni
• Challenges and opportunities for the adoption of molecular diagnostics for anthelmintic resistance
• Population genomic evidence that human and animal infections in Africa come from the same populations of Dracunculus medinensis
• Complete representation of a tapeworm genome reveals chromosomes capped by centromeres, necessitating a dual role in segregation and protection
• Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm
• Screening the Saccharomyces cerevisiae nonessential gene Deletion library reveals diverse mechanisms of action for antifungal plant defensins
• The global diversity of Haemonchus contortus is shaped by human intervention and climate
• The confounding effects of high genetic diversity on the determination and interpretation of differential gene expression analysis in the parasitic nematode Haemonchus contortus
• Evaluation of DNA Extraction Methods on Individual Helminth Egg and Larval Stages for Whole-Genome Sequencing
• Utility of the Onchocerca volvulus mitochondrial genome for delineation of parasite transmission zones
• Refugia and anthelmintic resistance: Concepts and challenges
• Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus
• Genome-wide sequencing uncovers cryptic diversity and mito-nuclear discordance in the Octopus vulgaris species complex
• Genome-wide approaches to Investigate anthelmintic resistance
• Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi
• Comparative genomics of the major parasitic worms
• Reduced variation in Wolbachia density of larval stages in comparison with adults of Onchocerca volvulus: implications for clinical outcome of infection?
• Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
• A Genome Resequencing-Based Genetic Map Reveals the Recombination Landscape of an Outbred Parasitic Nematode in the Presence of Polyploidy and Polyandry
• Genome-wide analysis of ivermectin response by Onchocerca volvulus reveals genetic drift and soft selective sweeps contribute to loss of drug sensitivity
• PLAG1 deficiency impairs spermatogenesis and sperm motility in mice
• Genomic introgression mapping of field-derived multiple-anthelmintic resistance in Teladorsagia circumcincta
• You Are What You Eat: A Genomic Analysis of the Gut Microbiome of Captive and Wild Octopus vulgaris Paralarvae and Their Zooplankton Prey
• Significant heterogeneity in Wolbachia copy number within and between populations of Onchocerca volvulus
• The genome of Onchocerca volvulus, agent of river blindness
• Outlier SNPs enable food traceability of the southern rock lobster, Jasus edwardsii
• Discrimination between Onchocerca volvulus and O. ochengi filarial larvae in Simulium damnosum (s.l.) and their distribution throughout central Ghana using a versatile high-resolution speciation assay
• Massively parallel sequencing of customised forensically informative SNP panels on the MiSeq
• Locating and Activating Molecular ‘Time Bombs’: Induction of Mycolata Prophages
• MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing
• Exemplary multiplex bisulfite amplicon data used to demonstrate the utility of Methpat
• Low-coverage MiSeq next generation sequencing reveals the mitochondrial genome of the Eastern Rock Lobster, Sagmariasus verreauxi
• Evidence of evolutionary constraints on the sequence composition of mitochondrial matrix targeting sequences
• Enhanced annealing of mismatched oligonucleotides using a novel melting curve assay allows efficient in vitro discrimination and restriction of a single nucleotide polymorphism
• Mitochondrial gene therapy an evaluation of strategies for the treatment of mitochondrial DNA disorders
• Differential intracellular distribution of DNA complexed with polyethylenimine (PEI) and PEI-polyarginine PTD influences exogenous gene expression within live COS-7 cells

misc

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